Discrete optimization for some TSP-like genome mapping problems

Discrete optimization for some TSP-like genome mapping problems

by Mester, D., (David)

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Title Statements

  • Full title :Discrete optimization for some TSP-like genome mapping problems / D. Mester ... [and others].

Edition Statements

  • Publication Date:2010

Publication Statements

The Physical Object

  • Description:1 online resource.

Edition Identifiers

  • ISBN:9781616683740, 1616683740
  • oclc:on1058941257
  • LC Classification:QH445.2
  • Dewey Decimal:572.8/633

Table of Contents

DISCRETE OPTIMIZATIONFOR TSP-LIKE GENOME MAPPING PROBLEMS; CONTENTS; PREFACE; 1. GENERAL INTRODUCTION; 2. GUIDED EVOLUTION STRATEGY ALGORITHM FOR CLASSIC TSP AS A BASIS FOR SOLVING THE GENETIC/GENOMIC TSP-LIKE PROBLEMS; 2.1. INTRODUCTION; 2.2. THE PROBLEM SOLVING METHODOLOGY; 2.2.1. The Improvement Heuristics; 2.2.2. Phase 1: A Guided Local Search Metaheuristic for the TSP; 2.2.3. Phase 2: Attempting Small Mutations; 2.3. EXPERIMENTAL RESULTS; 2.3.1. The Problem Data and Parameter Setting; 2.3.2. Analysis of Different Algorithm Configurations; 2.3.3. Results for Standard TSP Benchmarks.

3. MULTILOCUS GENETIC MAPPING3.1. INTRODUCTION; 3.2. EVOLUTION STRATEGIES FOR COMBINATORIAL OPTIMIZATION PROBLEMS; 3.3. THE EVOLUTION STRATEGY ALGORITHM WITH MULTI-PARAMETRIC MUTATOR (ES-MPM); 3.4. GUIDED EVOLUTION STRATEGIES (GES) FOR MGM; 3.5. EXPERIMENTS ON MGM USING SIMULATED DATASETS; 3.6. AN APPROACH TO INCREASE THE MAP RELIABILITY BY USING VERIFICATION PROCESS; 4. MULTILOCUS CONSENSUS GENETIC MAPPING: FORMULATION, MODEL AND ALGORITHMS; 4.1. INTRODUCTION; 4.2. MAIN IDEA OF THE APPROACH TO SOLVE MCGM; 4.3. FULL FRAME (FF) ALGORITHM FOR MCGM.

4.4. SPECIFIC CONFLICTED FRAMES (SCF) ALGORITHM FO…

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Subjects

Algorithmes ALGORITHMS Cartes chromosomiques -- Modèles mathém… Chromosome Mapping -- methods Gene mapping -- Mathematical models Mathematical optimization Optimisation mathématique

Writers

Mester, D., (David)

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