Next Generation Microarray Bioinformatics: Methods and Protocols

by Tan, Aik Choon Tian, Tianhai Wang, Junbai

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Title Statements

Full title :Next Generation Microarray Bioinformatics : Methods and Protocols / edited by Junbai Wang, Aik Choon Tan, Tianhai Tian.

Summary

Recent improvements in the efficiency, quality, and cost of genome-wide sequencing have prompted biologists and biomedical researchers to move away from microarray-based technology to ultra high-throughput, massively parallel genomic sequencing (Next Generation Sequencing, NGS) technology. In Next Generation Microarray Bioinformatics: Methods and Protocols, expert researchers in the field provide techniques to bring together current computational and statistical methods to analyze and interpreting both microarray and NGS data. These methods and techniques include resources for microarray bioinformatics, microarray data analysis, microarray bioinformatics in systems biology, next generation sequencing data analysis, and emerging applications of microarray and next generation sequencing. Written in the highly successful Methods in Molecular Biology"!series format, the chapters include the kind of detailed description and implementation advice that is crucial for getting optimal results in the laboratory. Authoritative and practical, Next Generation Microarray Bioinformatics: Methods and Protocols seeks to aid scientists in the further study of this crucially important research into the human DNA.

Edition Statements

Publication Date:2012.

Publication Statements

Publisher(s):Humana Press
Place of Publication:Totowa, NJ
Language:eng
Publication Date:2012.

Notes

Bibliographic Level Mode of Issuance: Monograph.

The Physical Object

Description:1 online resource (XVI, 401 pages 96 illustrations, 30 illustrations in color.)

Edition Identifiers

ISBN:161779399X, 9781617793998, 1617794007, 9781617794001
DOI:10.1007/978-1-61779-400-1.
oclc:on1109254140
LC Classification:QH324.2-324.25
Dewey Decimal:570.285

A Primer on the Current State of Microarray Technologies.- The KEGG Databases and Tools Facilitating Omics Analysis: Latest Developments Involving Human Diseases and Pharmaceuticals -- Strategies to Explore Functional Genomics Data Sets in NCBI's GEO Database.-Analyzing Cancer Samples with SNP Arrays -- Classification Approaches for Microarray Gene Expression Data Analysis.-Biclustering of Time Series Microarray Data -- Using the Bioconductor GeneAnswers Package to Interpret Gene Lists.- Analysis of Isoform Expression from Splicing Array using Multiple Comparisons.- Functional Comparison of Microarray Data across Multiple Platforms Using the Method of Percentage of Overlapping Functions -- Performance Comparison of Multiple Microarray Platforms for Gene Expression Profiling -- Integrative Approaches for Microarray Data Analysis-. Modelling Gene Regulation Networks using Ordinary Differential Equations -- Non-homogeneous Dynamic Bayesian Networks in Systems Biology.- Inference of Regulatory Networks from Microarray Data with R and the Bioconductor Package qpgraph -- Effective Nonlinear Methods for Inferring Genetic Regulation from Time-series Microarray Gene Expression Data -- An O…

Subjects

Acides nucléiques -- Hybridation Analytical, Diagnostic and Therapeutic … Bio-informatique Bioinformatics Biological Science Disciplines biological sciences Biologie biology Chemistry Techniques, Analytical Computational Biology Disciplines and Occupations DNA microarrays Genetic Techniques Genetics -- Technique Génétique -- Technique Investigative Techniques Life Sciences Microarray Analysis Microchip Analytical Procedures Molecular Probe Techniques