Phylogenomics: a primer

by DeSalle, Rob

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Title Statements

Full title :Phylogenomics : a primer / Rob DeSalle, Michael Tessler, Jeffrey Rosenfeld.

Edition Statements

Publication Date:©2021
Edition:Second edition

Publication Statements

Publisher(s):CRC Press, Taylor & Francis Group
Place of Publication:Boca Raton
Language:eng
Publication Date:©2021

Notes

Previous edition: 2013.

A Garland Science Book

The Physical Object

Description:xviii, 380 pages : : illustrations (black and white, and color) ; : 28 cm

Edition Identifiers

ISBN:9780367028527, 0367028522, 9780367028497, 0367028492
oclc:on1180054242
Dewey Decimal:572.838

Foundations of phylogenomics -- What is Phylogenomics? -- The biology and sequencing of genetic information: DNA, RNA, and proteins -- Evolutionary principles: populations and trees -- Data -- Data storage- the basics -- Sequence alignment and searching sequence databases -- Multiple alignments -- Genome sequencing and annotation -- Genomics databases: genomes and transcriptomes -- Amplicon databases: BoLD and bacterial 16S rDNA databases -- Phylogenetic/phylogenomic analysis -- Introduction to tree building -- Distance and clustering -- Maximum likelihood -- Search strategies and robustness -- Rare heterogeneity, long branch attraction, and likelihood models -- Bayesian approaches in phylogenetics -- Incongruence of gene trees -- Phylogenetic programs and websites -- Population genomics -- Population genetics and genomes -- Population genomics approaches -- Detecting natural selection: the basics -- Refining the approach to natural selection at the molecular level -- Phylogenomics in action -- Construction phylogenomics matrices -- Phylogenomics and the tree of life -- Comparative genomics -- Environmental DNA (eDNA) -- Phylogenomic approaches to understanding gene function and e…